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Characterisation of the environmental presence of hepatitis A virus in low-income and middle-income countries: a systematic review and meta-analysis.

Identifieur interne : 000175 ( Main/Exploration ); précédent : 000174; suivant : 000176

Characterisation of the environmental presence of hepatitis A virus in low-income and middle-income countries: a systematic review and meta-analysis.

Auteurs : Paul Kuodi [Oman, Afrique du Sud] ; Jenna Patterson [Afrique du Sud] ; Sheetal Silal [Afrique du Sud, Royaume-Uni] ; Gregory D. Hussey [Afrique du Sud] ; Benjamin M. Kagina [Afrique du Sud]

Source :

RBID : pubmed:32988941

Descripteurs français

English descriptors

Abstract

OBJECTIVE

To characterise the environmental presence of hepatitis A virus (HAV) in low- and middle-income countries (LMICs).

DESIGN

Systematic review and meta-analysis.

DATA SOURCES

EBSCOhost, PubMed, Scopus, ScienceDirect, Clinical Key and Web of Science were searched. Grey literature was sourced by searching the following electronic databases: Open Grey, National Health Research Database and Mednar.

ELIGIBILITY CRITERIA FOR INCLUDING STUDIES

Cross-sectional and ecological studies reporting HAV environmental presence and conducted in LMICs between January 2005 and May 2019, irrespective of language of publication.

DATA EXTRACTION AND DATA SYNTHESIS

Relevant data were extracted from articles meeting the inclusion criteria, and two reviewers independently assessed the studies for risk of bias. High heterogeneity of the extracted data led to the results being reported narratively.

RESULTS

A total of 2092 records were retrieved, of which 33 met the inclusion criteria. 21 studies were conducted in Tunisia, India and South Africa, and the rest were from Philippines, Pakistan, Morocco, Chad, Mozambique, Kenya and Uganda. In Tunisian raw sewage samples, the prevalence of HAV ranged from 12% to 68%, with an estimated average detection rate of 50% (95% CI 25 to 75), whereas HAV detection in treated sewage in Tunisia ranged from 23% to 65%, with an estimated average detection rate of 38% (95% CI 20 to 57). The prevalence of HAV detection in South African treated sewage and surface water samples ranged from 4% to 37% and from 16% to 76%, with an estimated average detection rates of 15% (95% CI 1 to 29) and 51% (95% CI 21 to 80), respectively. Over the review period, the estimated average detection rate of environmental HAV presence appeared to have declined by 10%.

CONCLUSION

The quality of included studies was fair, but sampling issues and paucity of data limited the strength of the review findings.

PROSPERO REGISTRATION NUMBER

CRD42019119592.


DOI: 10.1136/bmjopen-2019-036407
PubMed: 32988941
PubMed Central: PMC7523219


Affiliations:

Links toward previous steps (curation, corpus...)

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<term>Hepatitis A virus (MeSH)</term>
<term>Humans (MeSH)</term>
<term>India (MeSH)</term>
<term>Kenya (MeSH)</term>
<term>Morocco (MeSH)</term>
<term>Mozambique (MeSH)</term>
<term>Pakistan (MeSH)</term>
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<term>Mozambique (MeSH)</term>
<term>Ouganda (MeSH)</term>
<term>Pakistan (MeSH)</term>
<term>Pays en voie de développement (MeSH)</term>
<term>Philippines (MeSH)</term>
<term>République d'Afrique du Sud (MeSH)</term>
<term>Tunisie (MeSH)</term>
<term>Virus de l'hépatite A (MeSH)</term>
<term>Études transversales (MeSH)</term>
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<term>India</term>
<term>Kenya</term>
<term>Morocco</term>
<term>Mozambique</term>
<term>Pakistan</term>
<term>Philippines</term>
<term>South Africa</term>
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<term>Inde</term>
<term>Kenya</term>
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<term>Ouganda</term>
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<div type="abstract" xml:lang="en">
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<b>OBJECTIVE</b>
</p>
<p>To characterise the environmental presence of hepatitis A virus (HAV) in low- and middle-income countries (LMICs).</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>DESIGN</b>
</p>
<p>Systematic review and meta-analysis.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>DATA SOURCES</b>
</p>
<p>EBSCOhost, PubMed, Scopus, ScienceDirect, Clinical Key and Web of Science were searched. Grey literature was sourced by searching the following electronic databases: Open Grey, National Health Research Database and Mednar.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>ELIGIBILITY CRITERIA FOR INCLUDING STUDIES</b>
</p>
<p>Cross-sectional and ecological studies reporting HAV environmental presence and conducted in LMICs between January 2005 and May 2019, irrespective of language of publication.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>DATA EXTRACTION AND DATA SYNTHESIS</b>
</p>
<p>Relevant data were extracted from articles meeting the inclusion criteria, and two reviewers independently assessed the studies for risk of bias. High heterogeneity of the extracted data led to the results being reported narratively.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>RESULTS</b>
</p>
<p>A total of 2092 records were retrieved, of which 33 met the inclusion criteria. 21 studies were conducted in Tunisia, India and South Africa, and the rest were from Philippines, Pakistan, Morocco, Chad, Mozambique, Kenya and Uganda. In Tunisian raw sewage samples, the prevalence of HAV ranged from 12% to 68%, with an estimated average detection rate of 50% (95% CI 25 to 75), whereas HAV detection in treated sewage in Tunisia ranged from 23% to 65%, with an estimated average detection rate of 38% (95% CI 20 to 57). The prevalence of HAV detection in South African treated sewage and surface water samples ranged from 4% to 37% and from 16% to 76%, with an estimated average detection rates of 15% (95% CI 1 to 29) and 51% (95% CI 21 to 80), respectively. Over the review period, the estimated average detection rate of environmental HAV presence appeared to have declined by 10%.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>CONCLUSION</b>
</p>
<p>The quality of included studies was fair, but sampling issues and paucity of data limited the strength of the review findings.</p>
</div>
<div type="abstract" xml:lang="en">
<p>
<b>PROSPERO REGISTRATION NUMBER</b>
</p>
<p>CRD42019119592.</p>
</div>
</front>
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<AbstractText Label="ELIGIBILITY CRITERIA FOR INCLUDING STUDIES">Cross-sectional and ecological studies reporting HAV environmental presence and conducted in LMICs between January 2005 and May 2019, irrespective of language of publication.</AbstractText>
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